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MATLAB code for Multidimensional Diffusion MRIThis package contains MATLAB files to help researchers analyze multi-dimensional diffusion MRI data, for example, data acquired withb-tensors of varying shape.https://github.com/markus-nilsson/md-dmri Free Waveform (FWF) encoding pulse sequence resourcesResources to guide and assist in the use of the free waveform encoding sequence.https://github.com/f
https://www.msf.lu.se/mr-physics-group/software - 2025-11-05
Overview Features two classes for image display (single image and matrix of images) to be combined with plugins for grey/color-scale change, zooming and panning plugin for ROI definition and evaluation plugin for patient data overlay from DICOM data display and ROI classes create mouse/image change/palette change events handling of image sets via dedicated classes writing of DICOM3.0 format and di
https://www.msf.lu.se/research/mr-physics-group/software/mr-idl-library - 2025-11-05
LUPE is a modular software for calculation of brain perfusion parametric maps from dynamic susceptibility contrast perfusion weighted MR images. Source code and a runtime version (.sav file) are published here under the terms of the GPL. See the overview below for more info. Overview News: Latest version is 1.2. See the modules page for changes and additions. Included is now a 11-page user gui
https://www.msf.lu.se/research/mr-physics-group/software/lupe-lund-perfusion-program - 2025-11-05
As described, all program functionality is realized in separated modules. Inter-module communication is accomplished exclusively via a central container holding all image sets.The current version (1.2) encompasses the modules listed below. A couple of more experimental modules as a.o. CT -perfusion, image registration, and some code for ASL analysis are available upon request.Loading of a perfusio
https://www.msf.lu.se/research/mr-physics-group/software/lupe-lund-perfusion-program/modules - 2025-11-05
The latest program version is 1.2 Download (zip 2.8 MB) Lupe 1.2 is based on version 2.3 of the Lund IDL library. The zip file for download contains both, Lupe and the library against which it has been compiled and tested. Newer versions of the library might work, older versions will most likely not as program and library development go hand in hand. Important: By downloading and using the progr
https://www.msf.lu.se/research/mr-physics-group/software/lupe-lund-perfusion-program/download - 2025-11-05
BackgroundChemical Exchange Saturation Transfer (CEST) MRI is a new technology that can detect low (millimolar) concentrations of natural non-metallic magnetic marker molecules through the presence of groups with exchangeable protons, such as hydroxyls (OH), amides (NH) and amines (NH2). These protons interact with the water protons detected in MRI through physical exchange, generally referred to
https://www.msf.lu.se/research/mr-physics-group/research-environments/cest - 2025-11-05
BackgroundIn diffusion MRI (dMRI), images are sensitised to water diffusion by the application of magnetic field gradients. Cell membranes hinder the diffusional motion and thereby contribute to the contrast in dMRI. Thus, the diffusion of water molecules is used a probe of tissue microstructure. Specific WorkData from dMRI is often analysed using diffusion tensor imaging (DTI), which yields image
https://www.msf.lu.se/research/mr-physics-group/research-environments/microstructure-imaging-diffusion-mri - 2025-11-05
BackgroundFunctional MRI (fMRI) is a non-invasive technique for the study of brain function that utilizes changes in blood flow and volume accompanying brain activation. When neuronal activation occurs, local blood flow increases, leading to an increase in oxygenated blood. The different magnetic properties of oxygenated and deoxygenated blood yields signal changes in the MRI images. This effect i
https://www.msf.lu.se/research/mr-physics-group/research-environments/fmri - 2025-11-05
BackgroundPerfusion MRI typically refers to MRI-based measurements of microcirculatory parameters such as blood flow, blood volume and blood mean transit time. Imaging of perfusion-related parameters is of relevance in, for example, studies of dementia and trauma, assessment of the ischemic penumbra in acute ischemic stroke (in combination with diffusion MRI) to facilitate treatment decisions, inv
https://www.msf.lu.se/research/mr-physics-group/research-environments/perfusion - 2025-11-05
Background and AimWe develop and implement magnetic resonance imaging (MRI) methods for evaluation and diagnosis of musculoskeletal disease. Specifically, we focus on studies of early stage osteoarthritis (OA) which is the most common chronic condition of the joints. It is characterized by breakdown of joint cartilage but the whole joint is involved in the development of the disease. For example,
https://www.msf.lu.se/research/mr-physics-group/research-environments/qmsk-musculoskeletal-mri - 2025-11-05
IntroductionQuantitative MR means turning an MR scanner (the happy snappy camera of the radiologists) into am instrument for quantitative measurements (for the curious MR physicists) to determine volumes, concentrations of metabolites and contrast agents and the biophysical properties of tissue. The latter are presented as “parameter” maps, which are calculated from primary MR images. Quantitative
2020 - In Press Ahlstedt J, Förnvik K, Helms G, Salford LG, Ceberg C, Skagerberg G, Redebrandt HN.Growth pattern of experimental glioblastoma.Histol Histopathol. 2020 Feb 5:18207. doi: 10.14670/HH-18-207. [Epub ahead of print] Andersen KW, Lasič S, Lundell H, Nilsson M, Topgaard D, Sellebjerg F, Szczepankiewicz F, Siebner HR, Blinkenberg M, Dyrby TB. Disentangling white-matter damage from physio
https://www.msf.lu.se/research/mr-physics-group/publications/papers/2017-2020 - 2025-11-05
2016 Ahlgren A, Knutsson L, Wirestam R, Nilsson M, Ståhlberg F, Topgaard D, Lasič S. Quantification of microcirculatory parameters by joint analysis of flow-compensated and non-flow-compensated intravoxel incoherent motion (IVIM) data.NMR Biomed. 2016 May;29(5):640-9. Calamante F, Ahlgren A, van Osch MJ, Knutsson L.A novel approach to measure local cerebral haematocrit using MRI.J Cereb Blood Flow
https://www.msf.lu.se/research/mr-physics-group/publications/papers/2007-2016 - 2025-11-05
2006 Cronqvist M, Wirestam R, Ramgren B, Brandt L, Romner B, Nilsson O, Saveland H, Holtås S, Larsson EM:Endovascular Treatment of Intracerebral Arteriovenous Malformations: Procedural Safety, Complications, and Results Evaluated by MR Imaging, Including Diffusion and Perfusion Imaging. Am. J. Neuroradiol. 2006 Jan;27(1):162-76. Elfgren C, van Westen D, Passant U, Larsson EM, Mannfolk P, Fransson
https://www.msf.lu.se/research/mr-physics-group/publications/papers/1994-2006 - 2025-11-05
General informationThe 8th Öresund Workshop on Radiotherapy will take place on February 26-27, 2020, at Elite Hotel Marina Plaza in Helsingborg, located only 2-5 minutes of walk from the central station in Helsingborg, and from where the ferry from Helsingör docks, see map here. More information about the city of Helsingborg can be found here.ProgramThe meeting will start in the morning on Wednes
https://www.msf.lu.se/8th-oresund-workshop-radiotherapy - 2025-11-05
Sjukhusfysikerutbildningen vid Lunds universitet är en 5-årig yrkesutbildning på den naturvetenskapliga fakulteten i samarbete med den medicinska fakulteten och Region Skåne. Programmet söker du genom central antagning. För programmet gäller områdesbehörighet 10/A10 (Bi A, Fy B, Ke B och Ma E, eller Bi 1, Fy 2, Ke 2 och Ma 4).De två första årens kurser läser du tillsammans med andra fysikstudenter
https://www.msf.lu.se/sjukhusfysikerutbildning/om-utbildningen - 2025-11-05
Registration and abstract submission can only be made through this web form. Deadline will be on January 9, 2020. If you discover later that you need to cancel or make any changes to your registration, please notify us by email at your earliest convenience. Statusmeddelande Detta formulär är tyvärr stängt för nya inlämningar. Leave this field blank
https://www.msf.lu.se/formular/registration-8th-oresund-workshop-radiotherapy - 2025-11-05
Undervisning på LTH program FAFF35 Medicinsk FysikMedicinsk Fysik är en grundläggande fysikkurs som ingår i det obligatoriska kursblocket för civilingenjörsutbildningen Medicin och Teknik. Syftet med kursen är att studenten skall utveckla förståelse för grundläggande begrepp och samband inom fysiken vilka har betydelse för en civilingenjör i Medicin och teknik. Studenten skall fördjupa sin förståe
https://www.msf.lu.se/medicin-och-teknik - 2025-11-05
2013 Venue: The Wallenberg Laboratory, Malmö Program 2014 Venue: Elite Hotel Marina Plaza, Helsingborg Program Group Photo 2015 Venue: Elite Hotel Marina Plaza, Helsingborg Invited Speakers: Statistical significance and clinical relevance - Per Albertsson, Shalgrenska University Hospital Statistical issues in clinical trials - Ivan Vogelius, Rigshospitalet Dose response analysis - an examp
https://www.msf.lu.se/previous-oresund-workshop-meetings - 2025-11-05
Register here for the postgraduate course "The Monte Carlo Method in Medical Radiation Physics". Last day to register is 8th of May. Name (obligatorisk) Write your first and last name E-mail (obligatorisk) Occupation (obligatorisk) PhD student Department (obligatorisk) Write your department and its address Area of interest (obligatorisk) Nuclear medicine X-ray Radiotherapy MR In-depth assignment (
https://www.msf.lu.se/formular/registration-monte-carlo-postgraduate-course - 2025-11-05
